许冬清 博士、教授、博士生导师
E-mail: dongqingxu@njau.edu.cn
办公室：逸夫楼5026室
个人简介：
本科和硕士分别毕业于新葡的京集团350vip8888生物技术专业和作物遗传育种专业；博士毕业于瑞典哥德堡大学(Gothenburg University, Sweden)植物细胞与分子生物学专业。分别在新加坡淡码锡生命科学研究所(Temasek Life Sciences Laboratory, Singapore)、北京大学生命科学学院、南方科技大学生物系和美国得州大学奥斯汀分校(University of Texas at Austin)从事过研究助理、博士后、研究助理教授和研究学者工作。2018年7月作为高层次人才引进加入新葡的京集团350vip8888任教授。主要研究方向为植物光信号转导、大豆高光效分子遗传育种、大豆避荫反应分子机理和耐密植分子遗传育种。获国家级青年人才项目、江苏省杰出青年基金、江苏省“双创人才”高校创新类和国家自然科学基金面上项目等人才和科研项目资助。
研究方向：
大豆高光效分子遗传育种
大豆避荫反应分子机理和耐密植分子遗传育种
课题组每年招收硕士研究生和博士研究生，欢迎有志于作物遗传育种学或遗传学专业研究和深造的学生联系报考。
课题组常年招聘博士后，依托课题组申报南京农业大学钟山青年研究员岗位，待遇从优。有意者请发送个人简历。
发表论文：
1. Bian Y, Chu L, Lin H, Qi Y, Fang Z, Xu D. (2022). PIFs- and COP1-HY5-mediated temperature signaling in higher plants. Stress Biology In press.
2. Lan H, Heng Y, Li J, Zhang M, Bian Y, Chu L, Jiang Y, Wang X, Xu D*, Deng XW*. (2022). COP1 SUPPRESSOR 6 represses the PIF4 and PIF5 action to promote light-inhibited hypocotyl growth . J Integr. Plant Biol. In press. (*, co-corresponding author)
3. Zhou H, Zhu W, Wang X, Bian Y, Jiang Y, Wang L, Yin P, Deng XW, Xu D. (2022). A missense mutation in WRKY32 converts its function from a positive regulator to a repressor of photomorphogenesis. New Phytologist 235: 111-125.
4. Xiao Y, Chu L, Zhang Y, Bian Y, Xiao J, Xu D. (2022). HY5: a pivotal regulator of light-dependent development in higher plants. Frontiers in Plant Science 12: 800989.
5. Song Z, Heng Y, Bian Y, Xiao Y, Liu J, Zhao X, Jiang Y, Deng XW, Xu D. (2021). BBX11 promotes red light-mediated photomorphogenic development by modulating phyB-PIF4 signaling. aBIOTECH 2:117-130.
6. Song Z, Yan T, Liu J, Bian Y, Heng Y, Lin F, Jiang Y, Deng XW, Xu D. (2020). BBX28/BBX29, HY5 and BBX30/31 form a feedback loop to fine-tune photomorphogenic development. The Plant Journal 104(2):377-390.
7. Song Z, Bian Y, Liu J, Sun Y, Xu D. (2020). B-box Proteins: pivotal players in light-mediated development in plants. J Integr. Plant Biol. 62 (9): 1293-1309.
8. Zhu W, Zhou H, Lin F, Zhao X, Jiang Y, Xu D*, Deng XW*. (2020). COLD-REGULATED GENE 27 integrates signals from light and circadian rhythm in promoting hypocotyl growth in Arabidopsis. The Plant Cell 32(10): 3155-3169. (*, co-corresponding author)
9. Xu D*, Deng XW*. (2020). CBF-phyB-PIF module links light and low temperature signaling. Trends in Plant Science 25(10):952-954. (*, co-corresponding author)
10. Zhao X, Heng Y, Wang X, Deng XW, Xu D. (2020). A positive feedback loop of BBX11-BBX21-HY5 promotes photomorphogenic development in Arabidopsis. Plant Communications 1, 100045.
11.Xu D. (2020). COP1- and BBXs-HY5-mediated light signal transduction in plants. New Phytologist 228(6):1748-1753.
12.Heng Y, Jiang Y, Zhao X, Zhou H, Wang X, Deng XW, Xu D. (2019). BBX4, a phyB interacting and -modulated regulator, directly interacts with PIF3 to fine tune red light-mediated photomorphogenesis. Proc. Natl. Acad. Sci. USA 116(51):26049-26056.
13. Heng Y, Lin F, Jiang Y, Ding M, Yan T, Lan H, Zhou H, Zhao X, Xu D*, Deng XW*. (2019). B-box containing proteins BBX30 and BBX31, acting downstream of HY5, negatively regulate photomorphogenesis in Arabidopsis. Plant Physiology 180(1):497-508. (*, co-corresponding author)
14. Zhao X, Jiang Y, Li J, Huq E, Chen ZJ, Xu D*, Deng XW*. (2018). COP1 SUPPRESSOR 4 promotes seedling photomorphogenesis by repressing CCA1 and PIF4 expression in Arabidopsis. Proc. Natl. Acad. Sci. USA 115(45):11631-11636. (*, co-corresponding author)
15. Lin F, Jiang Y, Li J, Yan T, Fan L, Liang J, Chen ZJ, Xu D*, Deng XW*. (2018). BBX28 negatively regulates photomorphogenesis by repressing the transcription factor HY5 and undergoes COP1-mediated degradation. The Plant Cell 30(9):2006-2019. (*, co-corresponding author)
16. Xu D. (2018). Multifaceted roles of PIF4 in plants. Trends in Plant Science 23(9):749-751.
17. Xu D*, Jiang Y, Li J, Holm M, Deng XW*. (2018). The B-box domain protein BBX21 promotes photomorphogenesis. Plant Physiology 176:(3)2365-2375. (*, co-corresponding author)
18. Xu D*, Deng XW*. (2017). PINOID-mediated COP1 phosphorylation matters in photomorphogenesis in Arabidopsis. Proc. Natl. Acad. Sci. USA 114(39): E8136-E8137. (Letter) (*, co-corresponding author)
19. Lin F1, Xu D1,*, Jiang Y1, Chen H, Holm M, Fan L, Deng XW*. (2017). Phosphorylation and negative regulation of CONSTITUTIVELY PHOTOMORPHOGENENICLY 1 by PINOID in Arabidopsis. Proc. Natl. Acad. Sci. USA 114(25):6617-6622. (1, co-first author; *, co-corresponding author)
20. Xu D, Jiang Y, Li J, Lin F, Holm M, Deng XW. (2016). BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation. Proc. Natl. Acad. Sci. USA 113(27): 7655-7660.
21. Xu D, Zhu D, Deng XW. (2016). The role of COP1 in repression of photoperiodic flowering. F1000Research 5:178. (review)
22. Xu D, Lin F, Jiang Y, Ling J, Hettiarachchi C, Tellgren-Roth C, Holm M, Wei N, Deng XW. (2015). Arabidopsis COP1 SUPPRESSOR 2 represses COP1 E3 ubiquitin ligase activity through their coiled-coil domains association. PLoS Genetics 11(12): e1005747.
23. Xu D, Li J, Gangappa SN, Hettiarachchi C, Lin F, Andersson MX, Jiang Y, Deng XW, Holm M. (2014). Convergence of Light and ABA signaling on the ABI5 promoter. PLoS Genetics 10(2): e1004197.
24. Xu D, Lin F, Jiang Y, Huang X, Li J, Ling J, Hettiarachchi C, Tellgren-Roth C, Holm M, Deng XW. (2014). The RING-Finger E3 ubiquitin ligase COP1 SUPPRESSOR1 negatively regulates COP1 abundance in maintaining COP1 homeostasis in dark-grown Arabidopsis seedlings. The Plant Cell 26(5): 1981-1991.
25. Xu D1, Huang J1, Guo S, Yang X, Bao Y, Tang H, Zhang H. (2008). Overexpression of a TFIIIA-type zinc finger protein gene ZFP252 enhances drought and salt tolerance in rice (Oryza sativa L.). FEBS Letters 582 (7): 1037-1043. (1, co-first author)
合作发表论文：
26. Li T, Li H, Lian H, Song P, Wang Y, Duan J, Song Z, Cao Y, Xu D, Li J, Zhang H. (2022). SICKLE Represses Photomorphogenic Development of Arabidopsis Seedlings via HY5- and PIF4-Mediated Signaling. J Integr. Plant Biol. doi: 10.1111/jipb.13329.
27. Cao J, Liang Y, Yan T, Wang X, Zhou H, Chen C, Zhang Y, Zhang B, Zhang S, Liao J, Cheng S, Chu J, Huang X, Xu D, Li J, Deng XW, Lin F. (2022). The photomorphogenic repressors BBX28 and BBX29 integrate light and brassinosteroid signaling to inhibit seedling development in Arabidopsis. The Plant Cell 34(6):2266-2285.
28. Wang L, Cheng H, Wang Q, Si C, Yang Y, Yu Y, Zhou L, Ding L, Song A, Xu D, Chen SM, Fang W, Chen F, Jiang J. (2021). CmRCD1 represses flowering by directly interacting with CmBBX8 in summer chrysanthemum. Horticulture Research 8(1):79.
29. Zhao P, Zhang X, Gong Y, Wang D, Xu D, Wang N, Sun Y, Gao L, Liu S, Deng X, Kliebenstein D, Zhou X, Fang R, Ye J. (2021). Red-light is an environmental effector for mutualism between begomovirus and its vector whitefly. PLOS Pathogens 17(1):e1008770.
30. Qin N, Xu D, Li J, Deng XW. (2020). COP9 Signalosome: discovery, conservation, activity, and function. J Integr. Plant Biol. 62(1):90-103.
31. Song Q, Ando A, Xu D, Fang L , Zhang T, Huq E, Qiao H, Deng XW, Chen ZJ. (2018). Diurnal down-regulation of ethylene biosynthesis mediates biomass heterosis. Proc. Natl. Acad. Sci. USA 115(21):5606-5611.
32. Huang J, Sun S, Xu D, Lan H, Sun H, Wang Z, Bao Y, Wang J, Tang H, Zhang H. (2012). A TFIIIA-type zinc finger protein confers multiple abiotic stress tolerances in transgenic rice (Oryza sativa L.). Plant Molecular Biology 80 (3): 337-350.
33. Huang J, Sun S, Xu D, Yang X, Bao Y, Wang Z, Tang H, Zhang H. (2009). Increased tolerance of rice to cold, drought and oxidative stresses mediated by the overexpression of a gene that encodes the zinc finger protein ZFP245. Biochemical and Biophysical Research Communications 389 (3): 556-561.
34. Huang J, Wang M, Jiang Y, Bao Y, Sun H, Xu D, Lan H, Zhang H. (2008). Expression analysis of rice A20/AN1-type zinc finger genes and characterization of ZFP177 that contributes to temperature stress tolerance. Gene 420(2): 135-144.
